Job review #1473
Job #1473 review - http://old.mole.upol.cz/online/1473/
Generated on 2024-05-05 18:11:57 by service v2.3.29.2012.
9 tunnels click to expand / contract
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show | | profile | lining residues
Unique lining residues set - all
75 THR C, 100 ILE C, 2003 NA C, 107 THR C, 103 PHE C, 104 GLY C, 103 PHE C, 101 THR C, 101 THR C, 106 VAL C, 97 VAL C, 33 THR C
Unique lining residues set - sidechains
75 THR C, 100 ILE C, 2003 NA C, 107 THR C, 103 PHE C, 101 THR C, 106 VAL C, 97 VAL C, 33 THR C
Physicochemical properties of lining side-chains
Charge: 0 (0-0)
Hydropathy: 1.5
Hydrophobicity: 0.2
Polarity: 1.5
Mutability: 97
Lining residues
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# Res Btn Dist Hpa Hpb Pol Mut 1 75 THR C, 100 ILE C, 2003 NA C 2 100 ILE C, 2003 NA C 3 100 ILE C, 107 THR C, 2003 NA C 4 100 ILE C, 103 PHE C, 104 GLY C 5 100 ILE C, 103 PHE C, 107 THR C 6 100 ILE C, 101 THR C, 103 PHE C 7 101 THR C, 103 PHE C, 106 VAL C 8 97 VAL C, 101 THR C, 103 PHE C 9 33 THR C, 97 VAL C, 101 THR C 10 33 THR C, 97 VAL C, 101 THR C layer with bottle neck
layer with local minimum
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show | | profile | lining residues
Unique lining residues set - all
75 THR C, 100 ILE C, 2003 NA C, 74 THR C, 103 PHE C, 100 ILE C, 103 PHE C, 104 GLY C, 107 THR C, 101 THR C, 101 THR C, 106 VAL C, 97 VAL C, 33 THR C
Unique lining residues set - sidechains
75 THR C, 100 ILE C, 2003 NA C, 103 PHE C, 107 THR C, 101 THR C, 106 VAL C, 97 VAL C, 33 THR C
Physicochemical properties of lining side-chains
Charge: 0 (0-0)
Hydropathy: 1.2
Hydrophobicity: 0.08
Polarity: 1.77
Mutability: 97
Lining residues
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# Res Btn Dist Hpa Hpb Pol Mut 1 75 THR C, 100 ILE C, 2003 NA C 2 74 THR C, 75 THR C, 100 ILE C 3 74 THR C, 75 THR C, 2003 NA C 4 74 THR C, 75 THR C, 103 PHE C 5 74 THR C, 100 ILE C, 103 PHE C 6 74 THR C, 75 THR C, 100 ILE C 7 100 ILE C, 103 PHE C, 2003 NA C 8 100 ILE C, 2003 NA C 9 100 ILE C, 103 PHE C, 104 GLY C 10 100 ILE C, 103 PHE C, 107 THR C 11 100 ILE C, 101 THR C, 103 PHE C 12 101 THR C, 103 PHE C, 106 VAL C 13 97 VAL C, 101 THR C, 103 PHE C 14 33 THR C, 97 VAL C, 101 THR C layer with bottle neck
layer with local minimum
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show | | profile | lining residues
Unique lining residues set - all
75 THR C, 100 ILE C, 2003 NA C, 74 THR C, 100 ILE C, 103 PHE C, 104 GLY C, 107 THR C, 101 THR C, 103 PHE C, 101 THR C, 106 VAL C, 97 VAL C, 33 THR C
Unique lining residues set - sidechains
75 THR C, 100 ILE C, 2003 NA C, 103 PHE C, 107 THR C, 101 THR C, 106 VAL C, 97 VAL C, 33 THR C
Physicochemical properties of lining side-chains
Charge: 0 (0-0)
Hydropathy: 1.2
Hydrophobicity: 0.1
Polarity: 1.7
Mutability: 97
Lining residues
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# Res Btn Dist Hpa Hpb Pol Mut 1 75 THR C, 100 ILE C, 2003 NA C 2 74 THR C, 75 THR C, 100 ILE C 3 74 THR C, 75 THR C, 100 ILE C 4 74 THR C, 75 THR C, 100 ILE C 5 100 ILE C, 103 PHE C, 2003 NA C 6 103 PHE C, 104 GLY C, 2003 NA C 7 103 PHE C, 2003 NA C 8 103 PHE C, 107 THR C, 2003 NA C 9 100 ILE C, 103 PHE C, 107 THR C 10 100 ILE C, 101 THR C, 103 PHE C 11 101 THR C, 103 PHE C, 106 VAL C 12 97 VAL C, 101 THR C, 103 PHE C 13 33 THR C, 97 VAL C, 101 THR C layer with bottle neck
layer with local minimum
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show | | profile | lining residues
Unique lining residues set - all
75 THR C, 100 ILE C, 2003 NA C, 100 ILE C, 104 GLY C, 107 THR C, 111 ALA C, 115 VAL C, 119 GLN C, 124 HIS C
Unique lining residues set - sidechains
75 THR C, 100 ILE C, 2003 NA C, 107 THR C, 111 ALA C, 115 VAL C, 119 GLN C, 124 HIS C
Physicochemical properties of lining side-chains
Charge: 0 (0-0)
Hydropathy: -0.6
Hydrophobicity: -0.29
Polarity: 9.67
Mutability: 98
Lining residues
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# Res Btn Dist Hpa Hpb Pol Mut 1 75 THR C, 100 ILE C, 2003 NA C 2 100 ILE C, 2003 NA C 3 100 ILE C, 104 GLY C, 2003 NA C 4 104 GLY C, 2003 NA C 5 104 GLY C, 107 THR C, 2003 NA C 6 107 THR C, 2003 NA C 7 107 THR C 8 107 THR C, 2003 NA C 9 107 THR C 10 107 THR C, 2003 NA C 11 107 THR C 12 107 THR C, 111 ALA C 13 111 ALA C 14 111 ALA C, 115 VAL C 15 115 VAL C 16 115 VAL C, 119 GLN C 17 119 GLN C 18 115 VAL C, 119 GLN C 19 119 GLN C 20 119 GLN C, 124 HIS C 21 124 HIS C 22 119 GLN C, 124 HIS C 23 124 HIS C 24 119 GLN C, 124 HIS C 25 124 HIS C layer with bottle neck
layer with local minimum
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show | | profile | lining residues
Unique lining residues set - all
75 THR C, 100 ILE C, 2003 NA C, 100 ILE C, 104 GLY C, 107 THR C, 111 ALA C, 108 ALA C, 115 VAL C, 119 GLN C, 124 HIS C, 123 GLY C, 122 ARG C
Unique lining residues set - sidechains
75 THR C, 100 ILE C, 2003 NA C, 107 THR C, 111 ALA C, 115 VAL C, 119 GLN C, 124 HIS C,
Physicochemical properties of lining side-chains
Charge: 0 (0-0)
Hydropathy: -0.7
Hydrophobicity: -0.33
Polarity: 10.96
Mutability: 98
Lining residues
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# Res Btn Dist Hpa Hpb Pol Mut 1 75 THR C, 100 ILE C, 2003 NA C 2 100 ILE C, 2003 NA C 3 100 ILE C, 104 GLY C, 2003 NA C 4 104 GLY C, 2003 NA C 5 104 GLY C, 107 THR C, 2003 NA C 6 107 THR C, 2003 NA C 7 107 THR C 8 107 THR C, 2003 NA C 9 107 THR C 10 107 THR C, 2003 NA C 11 107 THR C 12 107 THR C, 111 ALA C 13 108 ALA C, 111 ALA C 14 111 ALA C 15 111 ALA C, 115 VAL C 16 115 VAL C 17 115 VAL C, 119 GLN C 18 119 GLN C 19 115 VAL C, 119 GLN C 20 119 GLN C 21 119 GLN C, 124 HIS C 22 124 HIS C 23 119 GLN C, 124 HIS C 24 124 HIS C 25 119 GLN C, 124 HIS C 26 124 HIS C 27 123 GLY C, 124 HIS C 28 122 ARG C, 123 GLY C, 124 HIS C 29 122 ARG C, 124 HIS C layer with bottle neck
layer with local minimum
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show | | profile | lining residues
Unique lining residues set - all
75 THR C, 100 ILE C, 2003 NA C, 104 GLY C, 107 THR C, 111 ALA C, 108 ALA C, 115 VAL C, 119 GLN C, 124 HIS C, 122 ARG C, 116 GLY C, 120 GLU C
Unique lining residues set - sidechains
75 THR C, 100 ILE C, 2003 NA C, 107 THR C, 111 ALA C, 115 VAL C, 119 GLN C, 124 HIS C, 122 ARG C, 120 GLU C
Physicochemical properties of lining side-chains
Charge: 0 (1-1)
Hydropathy: -1.3
Hydrophobicity: -0.37
Polarity: 16.74
Mutability: 94
Lining residues
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# Res Btn Dist Hpa Hpb Pol Mut 1 75 THR C, 100 ILE C, 2003 NA C 2 100 ILE C, 2003 NA C 3 104 GLY C, 2003 NA C 4 104 GLY C, 107 THR C, 2003 NA C 5 107 THR C, 2003 NA C 6 107 THR C 7 107 THR C, 2003 NA C 8 107 THR C 9 107 THR C, 2003 NA C 10 107 THR C 11 107 THR C, 111 ALA C 12 108 ALA C, 111 ALA C 13 111 ALA C 14 111 ALA C, 115 VAL C 15 115 VAL C 16 115 VAL C, 119 GLN C 17 119 GLN C 18 115 VAL C, 119 GLN C 19 119 GLN C 20 119 GLN C, 124 HIS C 21 124 HIS C 22 119 GLN C, 124 HIS C 23 119 GLN C, 122 ARG C, 124 HIS C 24 116 GLY C, 119 GLN C, 122 ARG C 25 116 GLY C, 119 GLN C, 120 GLU C 26 116 GLY C, 120 GLU C, 122 ARG C 27 120 GLU C, 122 ARG C, 124 HIS C layer with bottle neck
layer with local minimum
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show | | profile | lining residues
Unique lining residues set - all
75 THR C, 100 ILE C, 2003 NA C, 100 ILE C, 104 GLY C, 107 THR C, 111 ALA C, 108 ALA C, 115 VAL C, 119 GLN C, 124 HIS C, 123 GLY C, 122 ARG C, 120 GLU C, 122 ARG C
Unique lining residues set - sidechains
75 THR C, 100 ILE C, 2003 NA C, 107 THR C, 111 ALA C, 115 VAL C, 119 GLN C, 124 HIS C, 120 GLU C, 122 ARG C
Physicochemical properties of lining side-chains
Charge: 0 (1-1)
Hydropathy: -0.9
Hydrophobicity: -0.36
Polarity: 13.65
Mutability: 94
Lining residues
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# Res Btn Dist Hpa Hpb Pol Mut 1 75 THR C, 100 ILE C, 2003 NA C 2 100 ILE C, 2003 NA C 3 100 ILE C, 104 GLY C, 2003 NA C 4 104 GLY C, 2003 NA C 5 104 GLY C, 107 THR C, 2003 NA C 6 107 THR C, 2003 NA C 7 107 THR C 8 107 THR C, 2003 NA C 9 107 THR C 10 107 THR C, 2003 NA C 11 107 THR C 12 107 THR C, 111 ALA C 13 108 ALA C, 111 ALA C 14 111 ALA C 15 111 ALA C, 115 VAL C 16 115 VAL C 17 115 VAL C, 119 GLN C 18 119 GLN C 19 115 VAL C, 119 GLN C 20 119 GLN C 21 119 GLN C, 124 HIS C 22 124 HIS C 23 119 GLN C, 124 HIS C 24 124 HIS C 25 119 GLN C, 124 HIS C 26 124 HIS C 27 119 GLN C, 124 HIS C 28 124 HIS C 29 123 GLY C, 124 HIS C 30 122 ARG C, 123 GLY C, 124 HIS C 31 122 ARG C, 124 HIS C 32 120 GLU C, 122 ARG C, 124 HIS C layer with bottle neck
layer with local minimum
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show | | profile | lining residues
Unique lining residues set - all
75 THR C, 100 ILE C, 2003 NA C, 104 GLY C, 107 THR C, 111 ALA C, 108 ALA C, 115 VAL C, 119 GLN C, 124 HIS C, 122 ARG C, 116 GLY C, 118 GLU C, 120 GLU C, 121 ARG C, 117 ARG C, 26 TRP C
Unique lining residues set - sidechains
75 THR C, 100 ILE C, 2003 NA C, 107 THR C, 111 ALA C, 115 VAL C, 119 GLN C, 124 HIS C, 122 ARG C, 118 GLU C, 120 GLU C, 121 ARG C, 117 ARG C, 26 TRP C
Physicochemical properties of lining side-chains
Charge: 1 (3-2)
Hydropathy: -2
Hydrophobicity: -0.5
Polarity: 24.94
Mutability: 86
Lining residues
show all | hide all
# Res Btn Dist Hpa Hpb Pol Mut 1 75 THR C, 100 ILE C, 2003 NA C 2 100 ILE C, 2003 NA C 3 104 GLY C, 2003 NA C 4 104 GLY C, 107 THR C, 2003 NA C 5 107 THR C, 2003 NA C 6 107 THR C 7 107 THR C, 2003 NA C 8 107 THR C 9 107 THR C, 2003 NA C 10 107 THR C 11 107 THR C, 111 ALA C 12 108 ALA C, 111 ALA C 13 111 ALA C 14 111 ALA C, 115 VAL C 15 115 VAL C 16 115 VAL C, 119 GLN C 17 119 GLN C 18 115 VAL C, 119 GLN C 19 119 GLN C 20 119 GLN C, 124 HIS C 21 124 HIS C 22 119 GLN C, 124 HIS C 23 119 GLN C, 122 ARG C, 124 HIS C 24 119 GLN C, 122 ARG C 25 116 GLY C, 119 GLN C, 122 ARG C 26 116 GLY C, 118 GLU C, 122 ARG C 27 116 GLY C, 120 GLU C, 122 ARG C 28 116 GLY C, 118 GLU C, 120 GLU C 29 118 GLU C, 120 GLU C, 122 ARG C 30 118 GLU C, 120 GLU C, 121 ARG C 31 118 GLU C, 120 GLU C, 121 ARG C 32 117 ARG C, 118 GLU C, 120 GLU C 33 117 ARG C, 118 GLU C, 121 ARG C 34 26 TRP C, 117 ARG C, 118 GLU C layer with bottle neck
layer with local minimum
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show | | profile | lining residues
Unique lining residues set - all
75 THR C, 100 ILE C, 2003 NA C, 104 GLY C, 107 THR C, 111 ALA C, 108 ALA C, 115 VAL C, 119 GLN C, 124 HIS C, 123 GLY C, 122 ARG C, 120 GLU C, 122 ARG C, 121 ARG C, 117 ARG C, 118 GLU C, 26 TRP C
Unique lining residues set - sidechains
75 THR C, 100 ILE C, 2003 NA C, 107 THR C, 111 ALA C, 115 VAL C, 119 GLN C, 124 HIS C, 120 GLU C, 122 ARG C, 121 ARG C, 117 ARG C, 118 GLU C, 26 TRP C
Physicochemical properties of lining side-chains
Charge: 1 (3-2)
Hydropathy: -1.6
Hydrophobicity: -0.4
Polarity: 21.68
Mutability: 86
Lining residues
show all | hide all
# Res Btn Dist Hpa Hpb Pol Mut 1 75 THR C, 100 ILE C, 2003 NA C 2 100 ILE C, 2003 NA C 3 104 GLY C, 2003 NA C 4 104 GLY C, 107 THR C, 2003 NA C 5 107 THR C, 2003 NA C 6 107 THR C 7 107 THR C, 2003 NA C 8 107 THR C 9 107 THR C, 2003 NA C 10 107 THR C 11 107 THR C, 111 ALA C 12 108 ALA C, 111 ALA C 13 111 ALA C 14 111 ALA C, 115 VAL C 15 115 VAL C 16 115 VAL C, 119 GLN C 17 119 GLN C 18 115 VAL C, 119 GLN C 19 119 GLN C 20 119 GLN C, 124 HIS C 21 124 HIS C 22 119 GLN C, 124 HIS C 23 124 HIS C 24 119 GLN C, 124 HIS C 25 124 HIS C 26 123 GLY C, 124 HIS C 27 122 ARG C, 123 GLY C, 124 HIS C 28 122 ARG C, 124 HIS C 29 120 GLU C, 122 ARG C, 124 HIS C 30 120 GLU C, 122 ARG C 31 120 GLU C, 121 ARG C, 122 ARG C 32 120 GLU C, 121 ARG C 33 117 ARG C, 120 GLU C, 121 ARG C 34 117 ARG C, 121 ARG C 35 117 ARG C, 118 GLU C, 121 ARG C 36 26 TRP C, 117 ARG C, 118 GLU C layer with bottle neck
layer with local minimum
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38 cavities click to expand / contract
- (volume ~ 17813 Å3)
- (volume ~ 7425 Å3)
- (volume ~ 3896 Å3)
- (volume ~ 3896 Å3)
- (volume ~ 3896 Å3)
- (volume ~ 3896 Å3)
- (volume ~ 2964 Å3)
- (volume ~ 2964 Å3)
- (volume ~ 2964 Å3)
- (volume ~ 2964 Å3)
- (volume ~ 1466 Å3)
- (volume ~ 1466 Å3)
- (volume ~ 1466 Å3)
- (volume ~ 1466 Å3)
- (volume ~ 926 Å3)
- (volume ~ 926 Å3)
- (volume ~ 926 Å3)
- (volume ~ 926 Å3)
- (volume ~ 913 Å3)
- (volume ~ 913 Å3)
- (volume ~ 913 Å3)
- (volume ~ 913 Å3)
- (volume ~ 482 Å3)
- (volume ~ 482 Å3)
- (volume ~ 482 Å3)
- (volume ~ 482 Å3)
- (volume ~ 468 Å3)
- (volume ~ 468 Å3)
- (volume ~ 468 Å3)
- (volume ~ 468 Å3)
- (volume ~ 152 Å3)
- (volume ~ 152 Å3)
- (volume ~ 152 Å3)
- (volume ~ 152 Å3)
- (volume ~ 143 Å3)
- (volume ~ 143 Å3)
- (volume ~ 143 Å3)
- (volume ~ 143 Å3)